NHLBI BioData Catalyst® Powered by PIC-SURE
  • NHLBI BioData Catalyst® Powered by PIC-SURE User Guide
    • Frequently Asked Questions
  • Introduction to PIC-SURE
    • General Layout
    • Browse vs. Explore
  • Browse
    • Browse All Data
    • Features of Browse
  • Explore
    • Log in to Explore
    • Features of Explore
      • Prepare for Analysis
      • PFB Handoff to BioData Catalyst Powered by Terra
    • Manage Datasets
  • Data in PIC-SURE
    • Data Organization in BDC-PIC-SURE
      • BDC-PIC-SURE Data Format
    • Available Data & Managing Data Access
      • Publicly Available Datasets
      • TOPMed and TOPMed Related Datasets
        • Harmonized Data (TOPMed DCC Harmonized Clinical Variables)
      • BioLINCC Datasets
      • CONNECTS Datasets
  • Prepare for Data Analysis Using the PIC-SURE API
    • What is the PIC-SURE API?
    • PIC-SURE Personal Access Token
    • Analysis in the BioData Catalyst Ecosystem
      • BDC Powered by Seven Bridges
      • BDC Powered by Terra
    • Data Dictionaries via PIC-SURE API
    • More information about the PIC-SURE API
  • Citation and Acknowledgement of BioData Catalyst
  • Release Notes
    • Release Notes
      • 2025 May 8 Release
      • 2025 April 3 Release
      • 2025 March 5 Release
      • 2025 February 10 Release
      • 2024 Release Notes
        • 2024 December 19 Release
        • 2024 November 21 Release
        • 2024 November 4 Release
        • 2024 October 3 Release
        • 2024 September 5 Release
        • 2024 August 20 Release
        • 2024 August 1 Release
        • 2024 June 18 Release
        • 2024 May 29/30 Release
        • 2024 May 10/14 Release
        • 2024 March 26/28 Release
        • 2024 February 20/22 Release
        • 2024 January 30/31
        • 2024 January 16 Release
        • 2024 June 27 Release
      • 2023 Release Notes
        • 2023 December 12/14 Release
        • 2023 November 17 Release
        • 2023 October 23/31 Releases
        • 2023 October 13 Release
        • 2023 October 6 Release
        • 2023 September 28 Release
        • 2023 August 29 Release
        • 2023 July 27 Release
        • 2023 May 25 Release
        • 2023 March 30 Release
        • 2023 January 26 Release
  • Video Tutorials
    • Introduction to BioData Catalyst Powered by PIC-SURE
    • Basics: Finding Variables
    • Basics: Applying a Filter on a Variable
    • Basics: Editing a Variable Filter
    • PIC-SURE Open Access: Interpreting the Results
    • PIC-SURE Authorized Access: Add Variables to Export
    • PIC-SURE Authorized Access: Applying a Genomic Filter
    • PIC-SURE Authorized Access: Variable Distributions Tool
    • PIC-SURE Open Application Programming Interface (API)
  • Appendix
    • Glossary
    • Appendix 1: BDC Identifiers - dbGaP, TOPMed, and PIC-SURE
    • Appendix 2: Table of TOPMed DCC Harmonized Variables in PIC-SURE
Powered by GitBook
On this page
  • Links to PIC-SURE API GitHub repositories
  • PIC-SURE API
  • Python Clients & Adapters
  • R Clients & Adapters
  1. Prepare for Data Analysis Using the PIC-SURE API

More information about the PIC-SURE API

PreviousData Dictionaries via PIC-SURE APINextCitation and Acknowledgement of BioData Catalyst

Last updated 8 months ago

To learn more about the PIC-SURE API, please refer to the following links.

Links to PIC-SURE API GitHub repositories

PIC-SURE API

Python Clients & Adapters

PIC-SURE Python Client

PIC-SURE HPDS Python Client

PIC-SURE HPDS Python Adapter for BDC

R Clients & Adapters

PIC-SURE HPDS R Client

PIC-SURE HPDS R Client documentation

GitHub - hms-dbmi/pic-sure: PIC-SURE APIGitHub
GitHub - hms-dbmi/pic-sure-python-client: A client library for interacting with the PIC-SURE APIGitHub
GitHub - hms-dbmi/pic-sure-python-adapter-hpds: A Python client library for PIC-SURE-HPDS resourcesGitHub
GitHub - hms-dbmi/pic-sure-biodatacatalyst-python-adapter-hpds: A Python PIC-SURE adapter library for use in BioData Catalyst's Jupyter notebook environmentGitHub
GitHub - hms-dbmi/pic-sure-r-adapter-hpds: Adapter library for PIC-SURE HPDS Resources (in R language)GitHub
Logo
pic-sure-r-adapter-hpds/picsure_1.1.1.pdf at main · hms-dbmi/pic-sure-r-adapter-hpdsGitHub
Logo
Logo
Logo
Logo
Logo